sncRNA detail

ENST00000670680.1_10_70_+

Derived from ENST00000670680.1 • Homo Sapiens

78 libraries

sncRNA snapshot

Organism
Homo Sapiens
Precursor
MEG8-251
Gene
MEG8 (ENSG00000225746.15)
Precursor type
lncRNA
Sequence
ATGACAAATACCGGCGTATGAGTCTTGGATGATGAATAATACGTGTCTGGAACTCTGAGGT
Start
Start: 10
End
End: 70
Length
Length: 61
Expression (sum)
152638.00
Expression fraction
0.29
Expression (Avg non-zero)
1956.90
Expression (max)
61629.00
Expression (CPM sum)
3.86
Expression (CPM avg non-zero)
5.19
Expression (CPM max)
120.12
Prominence
100.0

Genomic Context

Precursor and gene context

Precursor overview

Transcript name
MEG8-251
Transcript ID
ENST00000670680.1
Chromosome
chr14
Genomic start
100968949
Genomic end
100990639

Gene context

Gene name
MEG8
Gene ID
ENSG00000225746.15
Gene type
lncRNA

Expression table

Showing 78 linked libraries
Library Biosample Expression Expression fraction Expression (CPM) Prominence
ENCFF000JNF vein endothelial cell (Primary cell) 1.00 10.00 0.03 100.00
ENCFF001REE GM12878 (Cell line) 1.00 1.37 0.00 100.00
ENCFF001REQ K562 (Cell line) 1.00 0.17 0.00 100.00
ENCFF001RER GM12878 (Cell line) 1.00 2.44 0.00 100.00
ENCFF001RLS parietal lobe (Tissue) 839.00 0.32 2.97 100.00
ENCFF001RLT temporal lobe (Tissue) 1589.00 0.45 2.64 100.00
ENCFF001RLU spinal cord (Tissue) 1600.00 0.30 5.44 100.00
ENCFF001RLV tongue (Tissue) 14846.00 0.37 40.27 100.00
ENCFF001RLW occipital lobe (Tissue) 56.00 0.07 0.18 100.00
ENCFF001RLX spinal cord (Tissue) 2341.00 0.28 4.29 100.00
ENCFF001RLY diencephalon (Tissue) 1772.00 0.14 5.06 100.00
ENCFF001RLZ heart (Tissue) 650.00 0.12 0.61 100.00
ENCFF001RMA skin of body (Tissue) 4433.00 0.34 10.92 100.00
ENCFF001RMB skeletal muscle tissue (Tissue) 12163.00 0.30 39.26 100.00
ENCFF001RMC temporal lobe (Tissue) 1224.00 0.43 2.51 100.00
ENCFF001RMD uterus (Tissue) 1003.00 0.26 1.66 100.00
ENCFF001RME occipital lobe (Tissue) 30.00 0.02 0.06 100.00
ENCFF001RMF metanephros (Tissue) 108.00 0.08 0.20 100.00
ENCFF001RMG parietal lobe (Tissue) 384.00 0.27 1.63 100.00
ENCFF001RMH lung (Tissue) 546.00 0.15 1.24 100.00
ENCFF001RMI skeletal muscle tissue (Tissue) 12631.00 0.27 54.78 100.00
ENCFF001RMJ skin of body (Tissue) 4926.00 0.30 12.81 100.00
ENCFF001RMK heart (Tissue) 658.00 0.16 1.14 100.00
ENCFF001RML cerebellum (Tissue) 652.00 0.13 1.21 100.00
ENCFF001RMM frontal cortex (Tissue) 519.00 0.14 0.86 100.00
ENCFF001RMN uterus (Tissue) 1481.00 0.21 2.83 100.00
ENCFF001RMO cerebellum (Tissue) 448.00 0.16 0.86 100.00
ENCFF001RMP frontal cortex (Tissue) 510.00 0.15 0.81 100.00
ENCFF001RMQ lung (Tissue) 595.00 0.21 0.90 100.00
ENCFF001RMR thyroid gland (Tissue) 1044.00 0.26 2.32 100.00
ENCFF001RMS diencephalon (Tissue) 1614.00 0.13 3.35 100.00
ENCFF001RMT thyroid gland (Tissue) 13044.00 0.22 17.21 100.00
ENCFF001RMU metanephros (Tissue) 389.00 0.03 0.82 100.00
ENCFF001RMV tongue (Tissue) 61629.00 0.78 120.12 100.00
ENCFF001RTT urinary bladder (Tissue) 2163.00 0.30 5.83 100.00
ENCFF001RTU liver (Tissue) 6003.00 0.20 17.89 100.00
ENCFF015UJX spleen (Tissue) 20.00 0.02 0.11 100.00
ENCFF062TYF GM23248 (Cell line) 9.00 0.07 0.39 100.00
ENCFF073SVL transverse colon (Tissue) 5.00 0.00 0.02 100.00
ENCFF076JME ovary (Tissue) 28.00 0.01 0.12 100.00
ENCFF081QYT esophagus squamous epithelium (Tissue) 2.00 0.00 0.00 100.00
ENCFF106XDA esophagus muscularis mucosa (Tissue) 1.00 0.00 0.00 100.00
ENCFF181JNF gastroesophageal sphincter (Tissue) 5.00 0.01 0.02 100.00
ENCFF195CBI testis (Tissue) 59.00 0.01 0.29 100.00
ENCFF211GIU transverse colon (Tissue) 7.00 0.02 0.03 100.00
ENCFF222USQ smooth muscle cell (In vitro differentiated cells) 12.00 0.02 0.01 100.00
ENCFF242SEA body of pancreas (Tissue) 80.00 0.02 0.35 100.00
ENCFF261XRS stomach (Tissue) 13.00 0.01 0.06 100.00
ENCFF295DXJ smooth muscle cell (In vitro differentiated cells) 10.00 0.02 0.01 100.00
ENCFF310THB vagina (Tissue) 9.00 0.00 0.04 100.00
ENCFF379KTQ stomach (Tissue) 3.00 0.00 0.01 100.00
ENCFF381DXM transverse colon (Tissue) 220.00 0.22 0.85 100.00
ENCFF400GBK spleen (Tissue) 3.00 0.00 0.01 100.00
ENCFF429ILE esophagus squamous epithelium (Tissue) 4.00 0.01 0.02 100.00
ENCFF476IAU esophagus squamous epithelium (Tissue) 1.00 0.01 0.00 100.00
ENCFF478BJL testis (Tissue) 7.00 0.00 0.04 100.00
ENCFF495VAK Peyer's patch (Tissue) 14.00 0.01 0.03 100.00
ENCFF516CUT adrenal gland (Tissue) 21.00 0.00 0.12 100.00
ENCFF518LYU hepatocyte (In vitro differentiated cells) 6.00 0.01 0.01 100.00
ENCFF534JKI spleen (Tissue) 2.00 0.00 0.01 100.00
ENCFF546NNZ uterus (Tissue) 2.00 0.00 0.01 100.00
ENCFF574WUG right lobe of liver (Tissue) 2.00 0.00 0.02 100.00
ENCFF583SZV stomach (Tissue) 9.00 0.00 0.04 100.00
ENCFF590YKZ GM23248 (Cell line) 22.00 0.06 0.43 100.00
ENCFF625OBY sigmoid colon (Tissue) 13.00 0.01 0.08 100.00
ENCFF643IED upper lobe of left lung (Tissue) 6.00 0.03 0.04 100.00
ENCFF645FQS transverse colon (Tissue) 67.00 0.11 0.35 100.00
ENCFF657CXK esophagus muscularis mucosa (Tissue) 2.00 0.00 0.01 100.00
ENCFF682YQJ spleen (Tissue) 8.00 0.01 0.04 100.00
ENCFF686BEE adrenal gland (Tissue) 17.00 0.00 0.11 100.00
ENCFF728EUS sigmoid colon (Tissue) 8.00 0.01 0.05 100.00
ENCFF744HOK gastroesophageal sphincter (Tissue) 8.00 0.01 0.02 100.00
ENCFF797VVQ esophagus muscularis mucosa (Tissue) 6.00 0.01 0.04 100.00
ENCFF800ZUT tibial nerve (Tissue) 16.00 0.01 0.13 100.00
ENCFF811DGS gastroesophageal sphincter (Tissue) 3.00 0.00 0.01 100.00
ENCFF903MJZ subcutaneous adipose tissue (Tissue) 8.00 0.00 0.02 100.00
ENCFF908XAD omental fat pad (Tissue) 4.00 0.00 0.01 100.00
ENCFF964DUY hepatocyte (In vitro differentiated cells) 2.00 0.01 0.00 100.00

RNA secondary structure