ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 3.00 2.21 0.00 100.0 HCN2-201 protein coding frontal cortex (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 47881.00 97.06 76.41 100.0 SLC49A4-201 protein coding frontal cortex (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 2337.00 13.35 3.73 100.0 ATP5MC3-201 protein coding frontal cortex (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 121.00 92.37 0.19 100.0 CDC25A-201 protein coding frontal cortex (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 8468.00 91.59 13.51 100.0 BLOC1S4-201 protein coding frontal cortex (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 298.00 12.42 0.48 100.0 ATAD5-201 protein coding frontal cortex (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 164.00 12.08 0.26 100.0 SLITRK5-201 protein coding frontal cortex (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 18.00 33.96 0.03 100.0 HASPIN-201 protein coding frontal cortex (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 390.00 67.13 0.62 100.0 PRR14L-201 protein coding frontal cortex (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 1745.00 97.16 2.78 100.0 ATG101-201 protein coding frontal cortex (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 240.00 68.97 0.38 100.0 PRICKLE1-201 protein coding frontal cortex (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 121.00 96.80 0.19 100.0 MIR133A2-201 miRNA frontal cortex (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 2.00 20.00 0.00 100.0 PBLD-204 protein coding frontal cortex (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 1076967.00 93.10 1718.67 99.34 MIRLET7BHG-201 lncRNA frontal cortex (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 39760.00 3.44 63.45 87.32 MIRLET7BHG-201 lncRNA frontal cortex (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 3.00 2.13 0.00 75.0 MIR375-201 miRNA frontal cortex (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 135.00 95.74 0.22 99.26 MIR375-201 miRNA frontal cortex (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 9805.00 80.95 15.65 100.0 MIR30E-201 miRNA frontal cortex (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 1208.00 9.97 1.93 100.0 MIR30E-201 miRNA frontal cortex (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 425.00 38.19 0.68 100.0 MIR29A-201 miRNA frontal cortex (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 1790.00 88.61 2.86 100.0 MIR345-201 miRNA frontal cortex (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 167173.00 99.15 266.78 100.0 MIR16-2-201 miRNA frontal cortex (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 3004.00 4.99 4.79 100.0 MIR340-201 miRNA frontal cortex (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 54179.00 89.94 86.46 100.0 MIR340-201 miRNA frontal cortex (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 13452.00 83.84 21.47 100.0 MIR107-201 miRNA frontal cortex (Tissue)