ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 3.00 5.08 0.01 100.0 HCN2-201 protein coding tongue (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 104.00 57.14 0.28 100.0 SLC49A4-201 protein coding tongue (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 32.00 1.35 0.09 100.0 ATP5MC3-201 protein coding tongue (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 322.00 95.83 0.87 100.0 CDC25A-201 protein coding tongue (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 1.00 1.64 0.00 100.0 RUNX3-201 protein coding tongue (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 4367.00 89.34 11.85 100.0 BLOC1S4-201 protein coding tongue (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 773.00 12.18 2.10 100.0 ATAD5-201 protein coding tongue (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 1155.00 57.61 3.13 100.0 SLITRK5-201 protein coding tongue (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 3809.00 59.46 10.33 100.0 HASPIN-201 protein coding tongue (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 702.00 72.82 1.90 100.0 PRR14L-201 protein coding tongue (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 6067.00 98.41 16.46 100.0 ATG101-201 protein coding tongue (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 10279.00 93.23 27.88 100.0 PRICKLE1-201 protein coding tongue (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 709144.00 94.74 1923.73 97.18 MIR133A2-201 miRNA tongue (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 29.00 23.58 0.08 100.0 PBLD-204 protein coding tongue (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 523094.00 90.17 1419.02 99.03 MIRLET7BHG-201 lncRNA tongue (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 32037.00 5.52 86.91 92.42 MIRLET7BHG-201 lncRNA tongue (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 4300.00 96.65 11.66 98.42 MIR375-201 miRNA tongue (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 76.00 1.71 0.21 36.19 MIR375-201 miRNA tongue (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 4199.00 61.11 11.39 100.0 MIR30E-201 miRNA tongue (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 1666.00 24.25 4.52 100.0 MIR30E-201 miRNA tongue (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 229.00 59.33 0.62 100.0 MIR29A-201 miRNA tongue (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 816.00 81.27 2.21 100.0 MIR345-201 miRNA tongue (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 63790.00 96.72 173.05 100.0 MIR16-2-201 miRNA tongue (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 129.00 2.19 0.35 100.0 MIR340-201 miRNA tongue (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 5390.00 91.60 14.62 100.0 MIR340-201 miRNA tongue (Tissue)