ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 1543.00 61.45 6.70 100.0 HCN2-201 protein coding body of pancreas (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 1.00 0.52 0.00 100.0 ATP5MC3-201 protein coding body of pancreas (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 1112.00 96.28 4.83 100.0 CDC25A-201 protein coding body of pancreas (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 1217.00 73.36 5.28 100.0 RUNX3-201 protein coding body of pancreas (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 498.00 45.77 2.16 100.0 BLOC1S4-201 protein coding body of pancreas (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 471.00 17.30 2.04 100.0 ATAD5-201 protein coding body of pancreas (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 278.00 2.54 1.21 100.0 SLITRK5-201 protein coding body of pancreas (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 239.00 39.70 1.04 100.0 HASPIN-201 protein coding body of pancreas (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 4744.00 98.50 20.59 100.0 ATG101-201 protein coding body of pancreas (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 313.00 76.72 1.36 100.0 PRICKLE1-201 protein coding body of pancreas (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 81.00 100.00 0.35 100.0 MIR133A2-201 miRNA body of pancreas (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 131.00 31.80 0.57 100.0 PBLD-204 protein coding body of pancreas (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 167864.00 78.76 728.66 97.0 MIRLET7BHG-201 lncRNA body of pancreas (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 23314.00 10.94 101.20 78.12 MIRLET7BHG-201 lncRNA body of pancreas (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 81251.00 3.88 352.69 75.35 MIR375-201 miRNA body of pancreas (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 1996855.00 95.28 8667.96 98.69 MIR375-201 miRNA body of pancreas (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 4642.00 58.15 20.15 100.0 MIR30E-201 miRNA body of pancreas (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 2351.00 29.45 10.21 100.0 MIR30E-201 miRNA body of pancreas (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 668.00 46.32 2.90 100.0 MIR29A-201 miRNA body of pancreas (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 175.00 84.54 0.76 100.0 MIR345-201 miRNA body of pancreas (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 1558.00 98.17 6.76 100.0 MIR16-2-201 miRNA body of pancreas (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 898.00 91.73 3.90 100.0 MIR340-201 miRNA body of pancreas (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 399.00 52.50 1.73 100.0 MIR107-201 miRNA body of pancreas (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 362.00 92.11 1.57 92.11 MIR381-201 miRNA body of pancreas (Tissue)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 2681.00 79.04 11.64 90.57 MIR103A2-201 miRNA body of pancreas (Tissue)