ENCFF015UJX

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR917CQJ
Description: Part of ENCODE experiment ENCSR917CQJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 188.00 47.72 1.06 100.0 HCN2-201 protein coding spleen (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 22.00 2.16 0.12 100.0 ATP5MC3-201 protein coding spleen (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 163.00 87.17 0.92 100.0 CDC25A-201 protein coding spleen (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 51.00 32.69 0.29 100.0 RUNX3-201 protein coding spleen (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 78.00 56.12 0.44 100.0 BLOC1S4-201 protein coding spleen (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 214.00 14.74 1.21 100.0 ATAD5-201 protein coding spleen (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 179.00 22.57 1.01 100.0 SLITRK5-201 protein coding spleen (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 31.00 41.89 0.17 100.0 HASPIN-201 protein coding spleen (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 451.00 97.62 2.54 100.0 ATG101-201 protein coding spleen (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 7.00 25.93 0.04 100.0 PRICKLE1-201 protein coding spleen (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 6.00 100.00 0.03 100.0 MIR133A2-201 miRNA spleen (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 6.00 6.98 0.03 100.0 PBLD-204 protein coding spleen (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 338607.00 88.65 1908.28 96.81 MIRLET7BHG-201 lncRNA spleen (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 15827.00 4.14 89.20 77.33 MIRLET7BHG-201 lncRNA spleen (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 1.00 1.61 0.01 33.33 MIR375-201 miRNA spleen (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 61.00 98.39 0.34 98.39 MIR375-201 miRNA spleen (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 5457.00 51.62 30.75 100.0 MIR30E-201 miRNA spleen (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 4428.00 41.89 24.95 100.0 MIR30E-201 miRNA spleen (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 413.00 36.81 2.33 100.0 MIR29A-201 miRNA spleen (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 98.00 80.99 0.55 100.0 MIR345-201 miRNA spleen (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 28991.00 98.41 163.38 100.0 MIR16-2-201 miRNA spleen (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 2528.00 96.64 14.25 100.0 MIR340-201 miRNA spleen (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 14.00 0.54 0.08 100.0 MIR340-201 miRNA spleen (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 1296.00 24.75 7.30 100.0 MIR107-201 miRNA spleen (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 219.00 77.66 1.23 82.64 MIR381-201 miRNA spleen (Tissue)