ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 57.00 10.94 0.11 100.0 HCN2-201 protein coding Peyer's patch (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 1.00 20.00 0.00 100.0 SLC49A4-201 protein coding Peyer's patch (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 9.00 6.29 0.02 100.0 ATP5MC3-201 protein coding Peyer's patch (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 113.00 74.83 0.22 100.0 CDC25A-201 protein coding Peyer's patch (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 3599.00 89.59 7.17 100.0 RUNX3-201 protein coding Peyer's patch (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 327.00 47.39 0.65 100.0 BLOC1S4-201 protein coding Peyer's patch (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 78.00 10.83 0.16 100.0 ATAD5-201 protein coding Peyer's patch (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 43.00 6.74 0.09 100.0 SLITRK5-201 protein coding Peyer's patch (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 63.00 29.86 0.13 100.0 HASPIN-201 protein coding Peyer's patch (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 539.00 96.77 1.07 100.0 ATG101-201 protein coding Peyer's patch (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 42.00 57.53 0.08 100.0 PRICKLE1-201 protein coding Peyer's patch (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 92.00 97.87 0.18 100.0 MIR133A2-201 miRNA Peyer's patch (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 4.00 13.79 0.01 100.0 PBLD-204 protein coding Peyer's patch (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 116766.00 83.70 232.49 97.52 MIRLET7BHG-201 lncRNA Peyer's patch (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 14690.00 10.53 29.25 84.47 MIRLET7BHG-201 lncRNA Peyer's patch (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 1920.00 1.91 3.82 66.39 MIR375-201 miRNA Peyer's patch (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 97761.00 97.22 194.65 99.31 MIR375-201 miRNA Peyer's patch (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 907.00 48.30 1.81 100.0 MIR30E-201 miRNA Peyer's patch (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 841.00 44.78 1.67 100.0 MIR30E-201 miRNA Peyer's patch (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 76.00 36.36 0.15 100.0 MIR29A-201 miRNA Peyer's patch (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 30.00 61.22 0.06 100.0 MIR345-201 miRNA Peyer's patch (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 2441.00 97.87 4.86 100.0 MIR16-2-201 miRNA Peyer's patch (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 165.00 97.63 0.33 100.0 MIR340-201 miRNA Peyer's patch (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 254.00 56.07 0.51 100.0 MIR107-201 miRNA Peyer's patch (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 43.00 89.58 0.09 89.58 MIR381-201 miRNA Peyer's patch (Tissue)