ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 7105.00 87.33 14.54 100.0 SLC49A4-201 protein coding temporal lobe (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 2441.00 7.56 5.00 100.0 ATP5MC3-201 protein coding temporal lobe (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 558.00 86.65 1.14 100.0 CDC25A-201 protein coding temporal lobe (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 3828.00 71.55 7.83 100.0 BLOC1S4-201 protein coding temporal lobe (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 787.00 4.23 1.61 100.0 ATAD5-201 protein coding temporal lobe (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 1753.00 56.49 3.59 100.0 SLITRK5-201 protein coding temporal lobe (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 22.00 31.88 0.05 100.0 HASPIN-201 protein coding temporal lobe (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 946.00 43.90 1.94 100.0 PRR14L-201 protein coding temporal lobe (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 5354.00 97.90 10.96 100.0 ATG101-201 protein coding temporal lobe (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 3374.00 88.46 6.91 100.0 PRICKLE1-201 protein coding temporal lobe (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 267.00 91.75 0.55 93.68 MIR133A2-201 miRNA temporal lobe (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 9.00 13.04 0.02 100.0 PBLD-204 protein coding temporal lobe (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 1305140.00 88.02 2671.29 99.02 MIRLET7BHG-201 lncRNA temporal lobe (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 102799.00 6.93 210.40 88.03 MIRLET7BHG-201 lncRNA temporal lobe (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 10.00 3.62 0.02 55.56 MIR375-201 miRNA temporal lobe (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 264.00 95.65 0.54 98.51 MIR375-201 miRNA temporal lobe (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 10188.00 66.42 20.85 100.0 MIR30E-201 miRNA temporal lobe (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 3283.00 21.40 6.72 100.0 MIR30E-201 miRNA temporal lobe (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 1863.00 47.57 3.81 100.0 MIR29A-201 miRNA temporal lobe (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 1852.00 85.82 3.79 100.0 MIR345-201 miRNA temporal lobe (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 235430.00 97.91 481.86 100.0 MIR16-2-201 miRNA temporal lobe (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 98109.00 88.87 200.80 100.0 MIR340-201 miRNA temporal lobe (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 4528.00 4.10 9.27 100.0 MIR340-201 miRNA temporal lobe (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 23758.00 80.83 48.63 100.0 MIR107-201 miRNA temporal lobe (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 7130.00 91.27 14.59 93.58 MIR381-201 miRNA temporal lobe (Tissue)