ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 4.00 6.15 0.02 100.0 HCN2-201 protein coding ovary (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 11.00 18.64 0.05 100.0 SLC49A4-201 protein coding ovary (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 4.00 2.55 0.02 100.0 ATP5MC3-201 protein coding ovary (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 139.00 75.96 0.61 100.0 CDC25A-201 protein coding ovary (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 258.00 79.38 1.14 100.0 RUNX3-201 protein coding ovary (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 43.00 45.26 0.19 100.0 BLOC1S4-201 protein coding ovary (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 118.00 21.81 0.52 100.0 ATAD5-201 protein coding ovary (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 57.00 4.71 0.25 100.0 SLITRK5-201 protein coding ovary (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 12.00 48.00 0.05 100.0 HASPIN-201 protein coding ovary (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 329.00 99.10 1.45 100.0 ATG101-201 protein coding ovary (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 7.00 63.64 0.03 100.0 PRICKLE1-201 protein coding ovary (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 97.00 96.04 0.43 100.0 MIR133A2-201 miRNA ovary (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 1.00 11.11 0.00 100.0 PBLD-204 protein coding ovary (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 447257.00 87.13 1969.14 96.34 MIRLET7BHG-201 lncRNA ovary (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 27150.00 5.29 119.53 79.24 MIRLET7BHG-201 lncRNA ovary (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 33.00 2.61 0.15 67.35 MIR375-201 miRNA ovary (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 1219.00 96.52 5.37 98.78 MIR375-201 miRNA ovary (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 3814.00 67.85 16.79 100.0 MIR30E-201 miRNA ovary (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 1460.00 25.97 6.43 100.0 MIR30E-201 miRNA ovary (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 443.00 46.15 1.95 100.0 MIR29A-201 miRNA ovary (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 88.00 94.62 0.39 100.0 MIR345-201 miRNA ovary (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 2310.00 98.47 10.17 100.0 MIR16-2-201 miRNA ovary (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 6.00 1.64 0.03 100.0 MIR340-201 miRNA ovary (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 344.00 93.99 1.51 100.0 MIR340-201 miRNA ovary (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 134.00 35.54 0.59 100.0 MIR107-201 miRNA ovary (Tissue)