ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 3.00 1.44 0.01 100.0 HCN2-201 protein coding thyroid gland (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 296.00 76.88 0.66 100.0 SLC49A4-201 protein coding thyroid gland (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 342.00 7.29 0.76 100.0 ATP5MC3-201 protein coding thyroid gland (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 54.00 62.79 0.12 100.0 CDC25A-201 protein coding thyroid gland (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 10.00 3.65 0.02 100.0 RUNX3-201 protein coding thyroid gland (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 1291.00 82.54 2.87 100.0 BLOC1S4-201 protein coding thyroid gland (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 445.00 5.98 0.99 100.0 ATAD5-201 protein coding thyroid gland (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 365.00 2.93 0.81 100.0 SLITRK5-201 protein coding thyroid gland (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 200.00 54.35 0.44 100.0 HASPIN-201 protein coding thyroid gland (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 2242.00 93.26 4.98 100.0 PRR14L-201 protein coding thyroid gland (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 4284.00 97.50 9.52 100.0 ATG101-201 protein coding thyroid gland (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 8031.00 90.39 17.85 100.0 PRICKLE1-201 protein coding thyroid gland (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 16055.00 96.37 35.69 98.62 MIR133A2-201 miRNA thyroid gland (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 8.00 26.67 0.02 100.0 PBLD-204 protein coding thyroid gland (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 561729.00 85.48 1248.61 98.14 MIRLET7BHG-201 lncRNA thyroid gland (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 59289.00 9.02 131.79 89.56 MIRLET7BHG-201 lncRNA thyroid gland (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 79.00 98.75 0.18 98.75 MIR375-201 miRNA thyroid gland (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 1.00 1.25 0.00 33.33 MIR375-201 miRNA thyroid gland (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 9542.00 77.16 21.21 100.0 MIR30E-201 miRNA thyroid gland (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 1371.00 11.09 3.05 100.0 MIR30E-201 miRNA thyroid gland (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 2001.00 48.37 4.45 100.0 MIR29A-201 miRNA thyroid gland (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 515.00 75.62 1.14 100.0 MIR345-201 miRNA thyroid gland (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 254582.00 97.95 565.88 100.0 MIR16-2-201 miRNA thyroid gland (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 240.00 3.15 0.53 100.0 MIR340-201 miRNA thyroid gland (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 6902.00 90.57 15.34 100.0 MIR340-201 miRNA thyroid gland (Tissue)