sncRNA detail

ENST00000616574.2_7_27_+

Derived from ENST00000616574.2 • Homo Sapiens

44 libraries

sncRNA snapshot

Organism
Homo Sapiens
Precursor
MIR376A1-201
Gene
MIR376A1 (ENSG00000283588.1)
Precursor type
miRNA
Sequence
GTAGATTCTCCTTCTATGAGT
Start
Start: 7
End
End: 27
Length
Length: 21
Expression (sum)
45154.00
Expression fraction
32.29
Expression (Avg non-zero)
1026.23
Expression (max)
19271.00
Expression (CPM sum)
1.18
Expression (CPM avg non-zero)
2.55
Expression (CPM max)
37.56
Prominence
100.0

Genomic Context

Precursor and gene context

Precursor overview

Transcript name
MIR376A1-201
Transcript ID
ENST00000616574.2
Chromosome
chr14
Genomic start
101040782
Genomic end
101040849

Gene context

Gene name
MIR376A1
Gene ID
ENSG00000283588.1
Gene type
miRNA

Expression table

Showing 44 linked libraries
Library Biosample Expression Expression fraction Expression (CPM) Prominence
ENCFF001RLS parietal lobe (Tissue) 66.00 29.07 0.23 100.00
ENCFF001RLT temporal lobe (Tissue) 227.00 36.79 0.38 100.00
ENCFF001RLU spinal cord (Tissue) 239.00 36.32 0.81 100.00
ENCFF001RLV tongue (Tissue) 6946.00 26.81 18.84 100.00
ENCFF001RLW occipital lobe (Tissue) 8.00 27.59 0.03 100.00
ENCFF001RLX spinal cord (Tissue) 602.00 36.33 1.10 100.00
ENCFF001RLY diencephalon (Tissue) 111.00 21.06 0.32 100.00
ENCFF001RLZ heart (Tissue) 73.00 21.41 0.07 100.00
ENCFF001RMA skin of body (Tissue) 714.00 46.97 1.76 100.00
ENCFF001RMB skeletal muscle tissue (Tissue) 5668.00 27.64 18.29 100.00
ENCFF511CAA neuronal stem cell (In vitro differentiated cells) 5.00 5.32 0.04 100.00
ENCFF001RMC temporal lobe (Tissue) 224.00 37.77 0.46 100.00
ENCFF001RMD uterus (Tissue) 55.00 14.14 0.09 100.00
ENCFF001RME occipital lobe (Tissue) 9.00 19.15 0.02 100.00
ENCFF001RMF metanephros (Tissue) 12.00 30.77 0.02 100.00
ENCFF001RMG parietal lobe (Tissue) 69.00 46.31 0.29 100.00
ENCFF001RMH lung (Tissue) 56.00 28.43 0.13 100.00
ENCFF001RMI skeletal muscle tissue (Tissue) 2896.00 32.53 12.56 100.00
ENCFF001RMJ skin of body (Tissue) 1564.00 28.50 4.07 100.00
ENCFF001RMK heart (Tissue) 155.00 54.96 0.27 100.00
ENCFF001RML cerebellum (Tissue) 46.00 16.79 0.09 100.00
ENCFF001RMM frontal cortex (Tissue) 40.00 36.70 0.07 100.00
ENCFF001RMN uterus (Tissue) 123.00 35.34 0.23 100.00
ENCFF001RMO cerebellum (Tissue) 71.00 45.81 0.14 100.00
ENCFF001RMP frontal cortex (Tissue) 22.00 21.78 0.04 100.00
ENCFF001RMQ lung (Tissue) 56.00 42.42 0.08 100.00
ENCFF001RMR thyroid gland (Tissue) 250.00 44.64 0.56 100.00
ENCFF001RMS diencephalon (Tissue) 84.00 18.75 0.17 100.00
ENCFF001RMT thyroid gland (Tissue) 3792.00 38.73 5.00 100.00
ENCFF001RMU metanephros (Tissue) 108.00 7.78 0.23 100.00
ENCFF001RMV tongue (Tissue) 19271.00 35.96 37.56 100.00
ENCFF001RTT urinary bladder (Tissue) 672.00 34.34 1.81 100.00
ENCFF001RTU liver (Tissue) 903.00 36.15 2.69 100.00
ENCFF062TYF GM23248 (Cell line) 1.00 14.29 0.04 100.00
ENCFF081QYT esophagus squamous epithelium (Tissue) 1.00 33.33 0.00 100.00
ENCFF211GIU transverse colon (Tissue) 2.00 100.00 0.01 100.00
ENCFF316MTC trophoblast cell (In vitro differentiated cells) 1.00 100.00 0.01 100.00
ENCFF379KTQ stomach (Tissue) 1.00 33.33 0.00 100.00
ENCFF503PBD mesendoderm (In vitro differentiated cells) 1.00 5.00 0.01 100.00
ENCFF516CUT adrenal gland (Tissue) 2.00 12.50 0.01 100.00
ENCFF714LDG trophoblast cell (In vitro differentiated cells) 1.00 20.00 0.01 100.00
ENCFF744HOK gastroesophageal sphincter (Tissue) 1.00 100.00 0.00 100.00
ENCFF797VVQ esophagus muscularis mucosa (Tissue) 1.00 100.00 0.01 100.00
ENCFF936FXF neuronal stem cell (In vitro differentiated cells) 5.00 6.10 0.04 100.00

RNA secondary structure