sncRNA detail

ENST00000608502.2_858_879_+

Derived from ENST00000608502.2 • Homo Sapiens

33 libraries

sncRNA snapshot

Organism
Homo Sapiens
Precursor
MIR219A2HG-201
Gene
MIR219A2HG (ENSG00000207955.5)
Precursor type
lncRNA
Sequence
AGAATTGTGGCTGGACATCTGT
Start
Start: 858
End
End: 879
Length
Length: 22
Expression (sum)
42727.00
Expression fraction
63.69
Expression (Avg non-zero)
1294.76
Expression (max)
31687.00
Expression (CPM sum)
1.11
Expression (CPM avg non-zero)
2.64
Expression (CPM max)
58.10
Prominence
100.0

Genomic Context

Precursor and gene context

Precursor overview

Transcript name
MIR219A2HG-201
Transcript ID
ENST00000608502.2
Chromosome
chr9
Genomic start
128392007
Genomic end
128393510

Gene context

Gene name
MIR219A2HG
Gene ID
ENSG00000207955.5
Gene type
lncRNA

Expression table

Showing 33 linked libraries
Library Biosample Expression Expression fraction Expression (CPM) Prominence
ENCFF001RLS parietal lobe (Tissue) 80.00 69.57 0.28 100.00
ENCFF001RLT temporal lobe (Tissue) 175.00 68.63 0.29 100.00
ENCFF001RLU spinal cord (Tissue) 7625.00 66.88 25.90 100.00
ENCFF001RLW occipital lobe (Tissue) 12.00 48.00 0.04 100.00
ENCFF001RLX spinal cord (Tissue) 31687.00 66.99 58.10 100.00
ENCFF001RLY diencephalon (Tissue) 645.00 66.29 1.84 100.00
ENCFF001RMB skeletal muscle tissue (Tissue) 1.00 4.55 0.00 100.00
ENCFF511CAA neuronal stem cell (In vitro differentiated cells) 6.00 20.69 0.05 100.00
ENCFF001RMC temporal lobe (Tissue) 100.00 67.11 0.20 100.00
ENCFF001RMD uterus (Tissue) 2.00 9.52 0.00 100.00
ENCFF001RME occipital lobe (Tissue) 35.00 59.32 0.07 100.00
ENCFF001RMG parietal lobe (Tissue) 30.00 44.12 0.13 100.00
ENCFF001RMJ skin of body (Tissue) 2.00 12.50 0.01 100.00
ENCFF001RML cerebellum (Tissue) 566.00 59.77 1.05 100.00
ENCFF001RMM frontal cortex (Tissue) 44.00 56.41 0.07 100.00
ENCFF001RMN uterus (Tissue) 1.00 20.00 0.00 100.00
ENCFF001RMO cerebellum (Tissue) 695.00 57.06 1.34 100.00
ENCFF001RMP frontal cortex (Tissue) 63.00 62.38 0.10 100.00
ENCFF001RMR thyroid gland (Tissue) 7.00 25.00 0.02 100.00
ENCFF001RMS diencephalon (Tissue) 562.00 66.20 1.17 100.00
ENCFF001RMT thyroid gland (Tissue) 7.00 16.28 0.01 100.00
ENCFF001RMU metanephros (Tissue) 1.00 5.56 0.00 100.00
ENCFF001RMV tongue (Tissue) 1.00 3.57 0.00 100.00
ENCFF004BLT GM23338 (Cell line) 15.00 12.82 0.02 100.00
ENCFF193XIP neural progenitor cell (In vitro differentiated cells) 6.00 33.33 0.00 100.00
ENCFF316MTC trophoblast cell (In vitro differentiated cells) 87.00 44.16 0.56 100.00
ENCFF450POH GM23338 (Cell line) 36.00 25.71 0.28 100.00
ENCFF503PBD mesendoderm (In vitro differentiated cells) 71.00 47.02 0.67 100.00
ENCFF518LYU hepatocyte (In vitro differentiated cells) 1.00 3.33 0.00 100.00
ENCFF714LDG trophoblast cell (In vitro differentiated cells) 98.00 46.45 0.65 100.00
ENCFF720JFQ mesendoderm (In vitro differentiated cells) 50.00 40.98 0.46 100.00
ENCFF936FXF neuronal stem cell (In vitro differentiated cells) 11.00 25.58 0.08 100.00
ENCFF994BMY neural progenitor cell (In vitro differentiated cells) 5.00 25.00 0.00 100.00

RNA secondary structure