ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 1139.00 6.79 48.76 100.0 MIRLET7A1HG-203 lncRNA GM23248 (Cell line)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 4476.00 90.35 191.63 100.0 MEG8-225 lncRNA GM23248 (Cell line)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 37270.00 92.42 1595.66 100.0 SNHG29-232 lncRNA GM23248 (Cell line)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 6.00 0.01 0.26 100.0 SNHG29-232 lncRNA GM23248 (Cell line)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 42.00 0.10 1.80 100.0 SNHG29-232 lncRNA GM23248 (Cell line)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 21.00 0.05 0.90 100.0 SNHG29-232 lncRNA GM23248 (Cell line)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 1682.00 4.17 72.01 100.0 SNHG29-232 lncRNA GM23248 (Cell line)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 400.00 0.99 17.13 100.0 SNHG29-232 lncRNA GM23248 (Cell line)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 1.00 1.33 0.04 100.0 SNHG14-234 lncRNA GM23248 (Cell line)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 1.00 1.33 0.04 100.0 SNHG14-234 lncRNA GM23248 (Cell line)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 3.00 4.00 0.13 100.0 SNHG14-234 lncRNA GM23248 (Cell line)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 1.00 1.33 0.04 50.0 SNHG14-234 lncRNA GM23248 (Cell line)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 220.00 26.10 9.42 97.35 ENST00000655317 lncRNA GM23248 (Cell line)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 267.00 31.67 11.43 100.0 ENST00000655317 lncRNA GM23248 (Cell line)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 17.00 2.02 0.73 7.05 ENST00000655317 lncRNA GM23248 (Cell line)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 8.00 0.95 0.34 100.0 ENST00000655317 lncRNA GM23248 (Cell line)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 95.00 9.52 4.07 72.52 LINC01962-202 lncRNA GM23248 (Cell line)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 499.00 50.00 21.36 100.0 LINC01962-202 lncRNA GM23248 (Cell line)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 98.00 9.82 4.20 100.0 LINC01962-202 lncRNA GM23248 (Cell line)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 2760.00 97.63 118.17 100.0 MEG8-228 lncRNA GM23248 (Cell line)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 1.00 2.27 0.04 100.0 SNHG14-254 lncRNA GM23248 (Cell line)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 5.00 0.21 0.21 100.0 LIMD1-AS1-204 lncRNA GM23248 (Cell line)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 2.00 0.09 0.09 100.0 LIMD1-AS1-204 lncRNA GM23248 (Cell line)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 821.00 34.97 35.15 90.12 LIMD1-AS1-204 lncRNA GM23248 (Cell line)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 1583.00 84.11 67.77 94.39 MIR99AHG-262 lncRNA GM23248 (Cell line)