ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 86.00 13.05 3.68 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 7828.00 88.63 335.14 98.39 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 2.00 0.16 0.09 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 110.00 8.91 4.71 56.7 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 13.00 43.33 0.56 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 4.00 6.35 0.17 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 9.00 3.38 0.39 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 2219.00 91.62 95.00 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 50.00 87.72 2.14 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 3051.00 52.97 130.62 92.04 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 70.00 1.22 3.00 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 19.00 0.24 0.81 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 185.00 70.08 7.92 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 21.00 3.90 0.90 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 58.00 17.16 2.48 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 117.00 34.62 5.01 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 2.00 0.59 0.09 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA GM23248 (Cell line)