Precursor detail

ENST00000658801.2

Linked gene LIMD1-AS1 • Homo Sapiens

3 sncRNAs

Precursor snapshot

Transcript name
LIMD1-AS1-204
Transcript ID
ENST00000658801.2
Precursor type
lncRNA
Chromosome
chr3
Genomic start
45676369
Genomic end
45689209
Strand
Not available

Precursor Annotation

Gene and transcript context

Gene context

Gene name
LIMD1-AS1
Gene ID
ENSG00000230530.3
Gene type
lncRNA

Transcript metrics

Total sncRNAs
3
Transcript length
12841

Expression table for sncRNAs derived from this precursor

Showing 1–3 of 3 results |
Columns to display
sncRNA Name Position in precursor Expression (sum) Expression fraction Expression (CPM sum) Prominence Biosamples
ENST00000658801.2_139_171_+ 139–171 160495.00 9.04 4.07 100.0
GM12878 (Cell line) K562 (Cell line) parietal lobe (Tissue) temporal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) uterus (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) spleen (Tissue) prostate gland (Tissue) GM23248 (Cell line) transverse colon (Tissue) ovary (Tissue) esophagus squamous epithelium (Tissue) esophagus muscularis mucosa (Tissue) right lobe of liver (Tissue) gastroesophageal sphincter (Tissue) upper lobe of left lung (Tissue) testis (Tissue) smooth muscle cell (In vitro differentiated cells) mesenchymal stem cell (In vitro differentiated cells) body of pancreas (Tissue) stomach (Tissue) OCI-LY7 (Cell line) vagina (Tissue) trophoblast cell (In vitro differentiated cells) A375 (Cell line) Peyer's patch (Tissue) mesendoderm (In vitro differentiated cells) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) HT-29 (Cell line) sigmoid colon (Tissue) tibial nerve (Tissue) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue) neural progenitor cell (In vitro differentiated cells)
ENST00000658801.2_139_214_+ 139–214 101620.00 5.73 2.58 100.0
GM12878 (Cell line) K562 (Cell line) temporal lobe (Tissue) tongue (Tissue) occipital lobe (Tissue) spinal cord (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) uterus (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) prostate gland (Tissue) GM23248 (Cell line) transverse colon (Tissue) ovary (Tissue) esophagus squamous epithelium (Tissue) esophagus muscularis mucosa (Tissue) gastroesophageal sphincter (Tissue) neural progenitor cell (In vitro differentiated cells) smooth muscle cell (In vitro differentiated cells) body of pancreas (Tissue) OCI-LY7 (Cell line) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue)
ENST00000658801.2_178_214_+ 178–214 343240.00 19.34 8.72 88.89
GM12878 (Cell line) K562 (Cell line) parietal lobe (Tissue) temporal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) uterus (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) spleen (Tissue) A375 (Cell line) prostate gland (Tissue) GM23248 (Cell line) transverse colon (Tissue) ovary (Tissue) esophagus squamous epithelium (Tissue) esophagus muscularis mucosa (Tissue) right lobe of liver (Tissue) gastroesophageal sphincter (Tissue) upper lobe of left lung (Tissue) neural progenitor cell (In vitro differentiated cells) testis (Tissue) smooth muscle cell (In vitro differentiated cells) mesenchymal stem cell (In vitro differentiated cells) body of pancreas (Tissue) stomach (Tissue) OCI-LY7 (Cell line) vagina (Tissue) trophoblast cell (In vitro differentiated cells) Peyer's patch (Tissue) mesendoderm (In vitro differentiated cells) neuronal stem cell (In vitro differentiated cells) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) HT-29 (Cell line) sigmoid colon (Tissue) tibial nerve (Tissue) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue)