ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 1273.00 67.89 1.05 97.18 MIR181A1HG-212 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 5.00 0.27 0.00 100.0 MIR181A1HG-212 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 5818.00 39.15 4.80 100.0 C19orf48P-218 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 7051.00 47.45 5.82 100.0 C19orf48P-218 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 4626.00 62.24 3.82 76.35 SNHG18-220 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 138.00 11.76 0.11 100.0 ENST00000817026 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 219.00 0.75 0.18 100.0 ENST00000823279 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 627.33 2.15 0.52 49.13 ENST00000823279 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 1510.57 5.18 1.25 61.21 ENST00000823279 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 1010.00 3.46 0.83 100.0 ENST00000823279 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 6106.00 20.93 5.04 99.25 ENST00000823279 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 969.85 3.32 0.80 45.75 ENST00000823279 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 999.61 3.43 0.82 30.37 ENST00000823279 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 715.00 2.45 0.59 80.88 ENST00000823279 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 539.35 1.85 0.44 36.03 ENST00000823279 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 1292.72 4.43 1.07 65.96 ENST00000823801 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 30181.00 9.45 24.89 100.0 GAS5-377 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 112.00 0.04 0.09 100.0 GAS5-377 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 735.00 0.23 0.61 100.0 GAS5-377 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 283679.00 88.86 233.97 100.0 GAS5-377 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 20.00 86.96 0.02 100.0 MIR205HG-245 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 443.00 16.81 0.37 100.0 TAF12-DT-204 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 1337250.00 97.26 1102.91 99.91 ZFAS1-238 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 361.00 0.03 0.30 100.0 ZFAS1-238 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 867.00 0.06 0.72 100.0 ZFAS1-238 lncRNA neural progenitor cell (In vitro differentiated cells)