ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 23070.00 84.53 19.03 100.0 ENST00000772672 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 19.00 0.07 0.02 100.0 ENST00000772672 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 53.00 0.19 0.04 100.0 ENST00000772672 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 17.00 15.74 0.01 100.0 ENST00000773843 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 468.00 0.03 0.39 100.0 SNHG12-223 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 319663.00 21.31 263.65 75.77 SNHG12-223 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 1174959.00 78.33 969.06 98.87 SNHG12-223 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 2262.00 0.02 1.87 100.0 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 9344259.00 98.85 7706.80 99.15 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 156.00 0.00 0.13 100.0 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 597.93 0.01 0.49 50.67 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 786.37 0.01 0.65 61.01 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 774.90 0.01 0.64 36.73 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 5088.00 0.05 4.20 98.78 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 615.00 0.01 0.51 100.0 SNHG25-206 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 13440.00 87.57 11.08 100.0 ENST00000778783 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 49.00 90.74 0.04 94.23 MIR155HG-205 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 7569.00 59.98 6.24 100.0 ENST00000785178 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 112.00 3.85 0.09 86.82 ENST00000786284 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1169.00 40.19 0.96 100.0 ENST00000786284 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 17.00 0.58 0.01 25.0 ENST00000786284 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 171881.00 88.51 141.76 94.86 ENST00000788343 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 8397.76 27.62 6.93 42.62 ENST00000797550 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2734.35 8.99 2.26 13.88 ENST00000797550 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 4319.00 14.21 3.56 95.55 ENST00000797550 lncRNA neural progenitor cell (In vitro differentiated cells)