ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 931.00 0.93 5.61 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 703.00 0.70 4.24 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 5319.00 5.33 32.07 92.39 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 78.00 0.08 0.47 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 3357.00 3.36 20.24 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 32.00 0.03 0.19 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 37141.00 37.21 223.97 99.91 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 270.00 0.27 1.63 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 9535.00 9.55 57.50 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 2304.00 2.31 13.89 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 23.00 0.02 0.14 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 3701.00 3.71 22.32 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 37.00 0.04 0.22 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 2195.00 2.20 13.24 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1044.00 1.05 6.30 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 5616.00 5.63 33.87 84.6 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 3030.00 3.04 18.27 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 169.00 0.17 1.02 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 2209.00 2.21 13.32 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 9176.00 9.19 55.33 100.0 GAS5-230 retained intron upper lobe of left lung (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 36.00 6.42 0.22 100.0 FTX-219 lncRNA upper lobe of left lung (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 323.00 57.58 1.95 90.48 FTX-219 lncRNA upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 1277.00 1.74 7.70 42.95 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 533.00 0.73 3.21 89.73 CTC1-214 protein coding upper lobe of left lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 36152.00 49.28 218.00 86.16 CTC1-214 protein coding upper lobe of left lung (Tissue)