ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 584259.00 94.88 3523.18 97.42 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 1649.00 20.93 9.94 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 8441.00 13.56 50.90 62.04 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 487.00 0.08 2.94 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 882.00 0.06 5.32 78.26 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 16482.00 74.55 99.39 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 17.00 0.10 0.10 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 618077.00 96.94 3727.11 99.03 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 570.00 0.13 3.44 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 409632.00 90.51 2470.15 97.62 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 252.00 19.40 1.52 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 41494.00 81.67 250.22 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 280.00 4.48 1.69 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 113220.00 97.68 682.74 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 3880.00 95.64 23.40 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 15277.00 16.81 92.12 82.59 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 1452.00 1.60 8.76 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 12.00 0.00 0.07 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 9680.00 27.01 58.37 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 655.00 1.62 3.95 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 1985.00 34.87 11.97 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 20.00 0.35 0.12 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 563.00 9.89 3.39 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA upper lobe of left lung (Tissue)