ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 92.00 6.07 0.55 100.0 HCN2-201 protein coding upper lobe of left lung (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 1.00 11.11 0.01 100.0 SLC49A4-201 protein coding upper lobe of left lung (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 33.00 12.22 0.20 100.0 ATP5MC3-201 protein coding upper lobe of left lung (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 792.00 29.74 4.78 100.0 CDC25A-201 protein coding upper lobe of left lung (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 10775.00 85.06 64.98 100.0 RUNX3-201 protein coding upper lobe of left lung (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 1876.00 53.51 11.31 100.0 BLOC1S4-201 protein coding upper lobe of left lung (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 213.00 10.24 1.28 100.0 ATAD5-201 protein coding upper lobe of left lung (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 220.00 7.80 1.33 100.0 SLITRK5-201 protein coding upper lobe of left lung (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 6.00 17.14 0.04 100.0 HASPIN-201 protein coding upper lobe of left lung (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 670.00 98.24 4.04 100.0 ATG101-201 protein coding upper lobe of left lung (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 59.00 36.65 0.36 100.0 PRICKLE1-201 protein coding upper lobe of left lung (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 82.00 94.25 0.49 95.35 MIR133A2-201 miRNA upper lobe of left lung (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 10.00 7.69 0.06 100.0 PBLD-204 protein coding upper lobe of left lung (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 159805.00 78.72 963.65 96.45 MIRLET7BHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 24098.00 11.87 145.31 77.58 MIRLET7BHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 2307.00 2.66 13.91 66.41 MIR375-201 miRNA upper lobe of left lung (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 83718.00 96.61 504.83 99.39 MIR375-201 miRNA upper lobe of left lung (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 2508.00 45.53 15.12 100.0 MIR30E-201 miRNA upper lobe of left lung (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 2565.00 46.57 15.47 100.0 MIR30E-201 miRNA upper lobe of left lung (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 1158.00 52.76 6.98 100.0 MIR29A-201 miRNA upper lobe of left lung (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 197.00 80.74 1.19 100.0 MIR345-201 miRNA upper lobe of left lung (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 4265.00 98.77 25.72 100.0 MIR16-2-201 miRNA upper lobe of left lung (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 1354.00 97.55 8.16 100.0 MIR340-201 miRNA upper lobe of left lung (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 670.00 37.90 4.04 100.0 MIR107-201 miRNA upper lobe of left lung (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 27.00 100.00 0.16 100.0 MIR381-201 miRNA upper lobe of left lung (Tissue)