ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 382.00 2.06 2.30 100.0 U2.3-201 snRNA upper lobe of left lung (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 799.00 4.31 4.82 100.0 U2.3-201 snRNA upper lobe of left lung (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 248.00 1.37 1.50 100.0 U2.6-201 snRNA upper lobe of left lung (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 121.00 0.18 0.73 14.29 ENST00000619323 lncRNA upper lobe of left lung (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 64859.00 96.09 391.11 98.17 ENST00000619323 lncRNA upper lobe of left lung (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 924.00 34.07 5.57 100.0 SCARNA4-202 scaRNA upper lobe of left lung (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 722.00 74.43 4.35 100.0 ENST00000625572 miRNA upper lobe of left lung (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 5198.00 94.80 31.34 100.0 ENST00000630615 snoRNA upper lobe of left lung (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 281.00 22.77 1.69 100.0 DMRT2-209 protein coding upper lobe of left lung (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 46.00 3.73 0.28 100.0 DMRT2-209 protein coding upper lobe of left lung (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 1643.00 50.26 9.91 100.0 SNORD98-201 snoRNA upper lobe of left lung (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 674.00 20.62 4.06 100.0 SNORD98-201 snoRNA upper lobe of left lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 31539.77 60.72 190.19 66.19 MIR106AHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 1.73 0.00 0.01 7.87 MIR106AHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 1.00 0.00 0.01 100.0 MIR106AHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 17.04 0.03 0.10 77.45 MIR106AHG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 43.00 39.81 0.26 100.0 MEG8-222 lncRNA upper lobe of left lung (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 13.00 12.04 0.08 100.0 MEG8-222 lncRNA upper lobe of left lung (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 25.00 1.68 0.15 100.0 SNHG14-224 lncRNA upper lobe of left lung (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 238.00 16.03 1.44 81.51 SNHG14-224 lncRNA upper lobe of left lung (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 152.00 10.24 0.92 58.46 SNHG14-224 lncRNA upper lobe of left lung (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 3797.84 9.64 22.90 55.07 5S_rRNA.20-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 122.00 4.24 0.74 100.0 HSPA9-211 retained intron upper lobe of left lung (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1760.00 61.24 10.61 84.53 HSPA9-211 retained intron upper lobe of left lung (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 1968.00 73.65 11.87 100.0 DNM3OS-205 lncRNA upper lobe of left lung (Tissue)