ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 1031.00 37.89 3.92 91.89 SNHG14-261 lncRNA gastroesophageal sphincter (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 135.00 0.72 0.51 100.0 LIMD1-AS1-204 lncRNA gastroesophageal sphincter (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 172.00 0.91 0.65 100.0 LIMD1-AS1-204 lncRNA gastroesophageal sphincter (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 5020.00 26.66 19.09 89.85 LIMD1-AS1-204 lncRNA gastroesophageal sphincter (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 3691.00 61.66 14.03 75.74 MIR99AHG-262 lncRNA gastroesophageal sphincter (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 366.00 6.11 1.39 100.0 MIR99AHG-262 lncRNA gastroesophageal sphincter (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 38.00 62.30 0.14 100.0 SNHG14-270 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 101.00 0.46 0.38 100.0 SNHG14-275 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 25.00 50.00 0.10 92.59 MIR9-2HG-225 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 75.00 21.68 0.29 100.0 MEG8-233 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 83.00 23.99 0.32 100.0 MEG8-233 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 589.00 2.48 2.24 100.0 SNHG14-278 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 19054.00 80.33 72.45 91.16 SNHG14-278 lncRNA gastroesophageal sphincter (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 562.00 36.26 2.14 100.0 MEG8-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 292.00 18.84 1.11 100.0 MEG8-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 229.00 75.83 0.87 100.0 SNHG17-252 lncRNA gastroesophageal sphincter (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 187.00 5.03 0.71 46.52 SNHG14-288 lncRNA gastroesophageal sphincter (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 3231.00 86.95 12.29 98.51 SNHG14-288 lncRNA gastroesophageal sphincter (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 17.00 2.99 0.06 100.0 SNHG14-295 lncRNA gastroesophageal sphincter (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 60.00 30.00 0.23 100.0 MEG8-240 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 2337.00 47.57 8.89 100.0 SNHG14-303 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 22.00 3.45 0.08 100.0 SNHG14-306 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 2.00 0.31 0.01 100.0 SNHG14-306 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 82.00 12.87 0.31 100.0 SNHG14-306 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 14.00 2.20 0.05 100.0 SNHG14-306 lncRNA gastroesophageal sphincter (Tissue)