ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 1.00 0.35 0.00 100.0 ENST00000666735 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 6.00 2.13 0.02 100.0 ENST00000666735 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 116.00 34.42 0.44 100.0 MEG8-242 lncRNA gastroesophageal sphincter (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 535.10 23.45 2.03 32.33 SNHG14-312 lncRNA gastroesophageal sphincter (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 1029.44 45.11 3.91 62.2 SNHG14-312 lncRNA gastroesophageal sphincter (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 24.00 0.16 0.09 100.0 MEG8-244 lncRNA gastroesophageal sphincter (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 135.00 0.88 0.51 100.0 MEG8-244 lncRNA gastroesophageal sphincter (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 14828.00 96.72 56.38 99.19 MEG8-244 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 71.00 0.01 0.27 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 11.00 0.00 0.04 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 2250.00 0.38 8.56 98.86 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 507.29 0.09 1.93 65.8 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 2050.00 0.35 7.79 73.16 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 285638.00 48.32 1086.08 99.58 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 407.00 0.07 1.55 73.6 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 8394.00 1.42 31.92 99.31 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 535.00 0.09 2.03 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 141131.00 23.88 536.62 99.94 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 232.00 0.04 0.88 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 34.00 0.01 0.13 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 69.00 0.01 0.26 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 94.00 0.02 0.36 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 281.00 0.05 1.07 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 146.00 0.02 0.56 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 29133.00 4.93 110.77 100.0 SNHG1-248 lncRNA gastroesophageal sphincter (Tissue)