ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 38770.00 51.44 147.42 94.05 ENST00000651540 lncRNA gastroesophageal sphincter (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 2796.00 1.10 10.63 100.0 MIRLET7A1HG-203 lncRNA gastroesophageal sphincter (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 447.00 80.69 1.70 100.0 MEG8-225 lncRNA gastroesophageal sphincter (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 25971.00 93.88 98.75 100.0 SNHG29-232 lncRNA gastroesophageal sphincter (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 269.00 0.97 1.02 100.0 SNHG29-232 lncRNA gastroesophageal sphincter (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 4.00 0.01 0.02 100.0 SNHG29-232 lncRNA gastroesophageal sphincter (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 535.00 1.93 2.03 100.0 SNHG29-232 lncRNA gastroesophageal sphincter (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 353.00 1.28 1.34 100.0 SNHG29-232 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 65.00 0.85 0.25 100.0 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 2266.00 29.78 8.62 94.61 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 5.00 0.07 0.02 100.0 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 1035.00 13.60 3.94 100.0 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 511.00 6.72 1.94 100.0 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 1141.00 15.00 4.34 81.04 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 266.00 3.27 1.01 21.43 ENST00000655317 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 929.00 11.42 3.53 100.0 ENST00000655317 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 2736.00 33.64 10.40 90.72 ENST00000655317 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 798.00 9.81 3.03 100.0 ENST00000655317 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 2308.00 0.32 8.78 84.64 LINC01962-202 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 709171.00 98.89 2696.48 100.0 LINC01962-202 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 205.00 0.03 0.78 100.0 LINC01962-202 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 691.00 17.51 2.63 94.79 SNHG14-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 2984.00 87.66 11.35 100.0 MEG8-228 lncRNA gastroesophageal sphincter (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 737.00 41.10 2.80 100.0 SNHG14-254 lncRNA gastroesophageal sphincter (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 582.00 21.39 2.21 100.0 SNHG14-261 lncRNA gastroesophageal sphincter (Tissue)