ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 1337.00 71.69 5.08 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 1168.00 33.41 4.44 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 1567.00 53.34 5.96 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 34943.00 95.79 132.86 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 22037.00 98.36 83.79 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 3675.00 25.70 13.97 95.9 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 67.00 0.47 0.25 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 40.00 0.00 0.15 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 980.00 65.16 3.73 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 20.00 0.42 0.08 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 165.00 4.32 0.63 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 606.00 15.88 2.30 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 85.00 2.23 0.32 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA gastroesophageal sphincter (Tissue)