ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1476.00 4.28 2.69 100.0 RACK1-229 protein coding esophagus squamous epithelium (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 40151.00 31.52 73.29 63.05 RACK1-230 retained intron esophagus squamous epithelium (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 85114.00 66.81 155.36 89.8 RACK1-230 retained intron esophagus squamous epithelium (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 23.00 1.58 0.04 100.0 RNA5SP486-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1260.00 89.81 2.30 100.0 SCARNA5-201 scaRNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 269.00 0.25 0.49 66.26 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 9245.00 8.67 16.88 58.78 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 7974.00 7.47 14.56 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 262.00 0.25 0.48 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 224.00 0.21 0.41 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 323.00 0.30 0.59 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 32636.00 30.59 59.57 97.65 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 2110.00 1.98 3.85 72.83 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 44.00 0.04 0.08 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 521.00 0.49 0.95 55.37 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 43.00 0.04 0.08 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 32130.00 30.12 58.65 99.3 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 4678.00 77.23 8.54 85.65 MIR3142HG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 11249.00 93.82 20.53 100.0 SNHG6-204 retained intron esophagus squamous epithelium (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 5332.00 20.13 9.73 100.0 MIR151A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 18381.00 69.40 33.55 88.98 MIR151A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1978.00 99.70 3.61 100.0 DENND3-221 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 51.00 0.59 0.09 55.43 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 656.00 7.59 1.20 71.15 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 41.00 0.47 0.07 44.57 WDR74-204 protein coding esophagus squamous epithelium (Tissue)