ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 7122.00 53.53 13.00 97.74 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 62.00 0.47 0.11 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 60.00 0.29 0.11 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 524.00 49.53 0.96 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 500.00 19.82 0.91 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 101.00 3.11 0.18 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 242.00 7.45 0.44 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 123.00 3.78 0.22 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 2.00 5.26 0.00 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA esophagus squamous epithelium (Tissue)