Precursor detail

ENST00000515961.1

Linked gene RNA5SP486 • Homo Sapiens

1 sncRNAs

Precursor snapshot

Transcript name
RNA5SP486-201
Transcript ID
ENST00000515961.1
Precursor type
rRNA pseudogene
Chromosome
chr20
Genomic start
47873191
Genomic end
47873273
Strand
+

Precursor Annotation

Gene and transcript context

Gene context

Gene name
RNA5SP486
Gene ID
ENSG00000251770.1
Gene type
rRNA_pseudogene

Transcript metrics

Total sncRNAs
1
Transcript length
83

Expression table for sncRNAs derived from this precursor

Showing 1–1 of 1 results |
Columns to display
sncRNA Name Position in precursor Expression (sum) Expression fraction Expression (CPM sum) Prominence Biosamples
ENST00000515961.1_38_58_+ 38–58 41660.00 5.79 1.07 100.0
GM12878 (Cell line) K562 (Cell line) temporal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) neuronal stem cell (In vitro differentiated cells) uterus (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) spleen (Tissue) A375 (Cell line) prostate gland (Tissue) transverse colon (Tissue) ovary (Tissue) esophagus squamous epithelium (Tissue) esophagus muscularis mucosa (Tissue) right lobe of liver (Tissue) gastroesophageal sphincter (Tissue) upper lobe of left lung (Tissue) neural progenitor cell (In vitro differentiated cells) testis (Tissue) smooth muscle cell (In vitro differentiated cells) mesenchymal stem cell (In vitro differentiated cells) body of pancreas (Tissue) stomach (Tissue) OCI-LY7 (Cell line) vagina (Tissue) trophoblast cell (In vitro differentiated cells) Peyer's patch (Tissue) mesendoderm (In vitro differentiated cells) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) HT-29 (Cell line) GM23248 (Cell line) sigmoid colon (Tissue) tibial nerve (Tissue) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue)