ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 18.00 78.26 0.77 100.0 MIR15B-201 miRNA GM23248 (Cell line)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 15.00 55.56 0.64 100.0 MIR542-201 miRNA GM23248 (Cell line)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 3.00 9.09 0.13 100.0 MIR500A-201 miRNA GM23248 (Cell line)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 24.00 72.73 1.03 100.0 MIR500A-201 miRNA GM23248 (Cell line)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 32.00 2.00 1.37 71.11 MIR30A-201 miRNA GM23248 (Cell line)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 9.00 0.56 0.39 100.0 MIR30A-201 miRNA GM23248 (Cell line)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 1478.00 92.38 63.28 99.13 MIR30A-201 miRNA GM23248 (Cell line)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 53.00 3.31 2.27 100.0 MIR30A-201 miRNA GM23248 (Cell line)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 9234.00 88.66 395.34 91.32 MIR27B-201 miRNA GM23248 (Cell line)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 93.00 0.89 3.98 100.0 MIR27B-201 miRNA GM23248 (Cell line)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 1.00 50.00 0.04 100.0 MIR196A2-201 miRNA GM23248 (Cell line)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 341.00 83.99 14.60 89.03 MIR654-201 miRNA GM23248 (Cell line)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 217.00 81.89 9.29 100.0 MIR152-201 miRNA GM23248 (Cell line)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 4.00 80.00 0.17 100.0 MIR138-1-201 miRNA GM23248 (Cell line)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 81.00 85.26 3.47 100.0 MIR30C1-201 miRNA GM23248 (Cell line)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 5.00 83.33 0.21 100.0 MIR660-201 miRNA GM23248 (Cell line)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 1167.00 38.24 49.96 100.0 MIR125B1-201 miRNA GM23248 (Cell line)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 1591.00 52.13 68.12 94.42 MIR125B1-201 miRNA GM23248 (Cell line)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 28.00 37.84 1.20 100.0 MIR493-201 miRNA GM23248 (Cell line)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 41.00 55.41 1.76 100.0 MIR493-201 miRNA GM23248 (Cell line)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 1.90 95.24 0.08 95.24 MIR182-201 miRNA GM23248 (Cell line)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 8643.00 92.38 370.04 95.2 MIR100-201 miRNA GM23248 (Cell line)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 47.00 97.92 2.01 100.0 MIR301A-201 miRNA GM23248 (Cell line)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 108.00 48.87 4.62 81.2 MIR130A-201 miRNA GM23248 (Cell line)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 109.00 49.32 4.67 71.71 MIR130A-201 miRNA GM23248 (Cell line)