ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 4794.00 98.64 205.25 99.58 MIRLET7F2-201 miRNA GM23248 (Cell line)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 53.00 35.81 2.27 100.0 MIR140-201 miRNA GM23248 (Cell line)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 9.00 20.93 0.39 100.0 MIR106B-201 miRNA GM23248 (Cell line)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 6.00 13.95 0.26 46.15 MIR106B-201 miRNA GM23248 (Cell line)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 277.00 63.24 11.86 100.0 SNORD83A-201 snoRNA GM23248 (Cell line)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 51.00 11.64 2.18 100.0 SNORD83A-201 snoRNA GM23248 (Cell line)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 159.00 67.95 6.81 100.0 SNORD41-201 snoRNA GM23248 (Cell line)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 6.00 2.13 0.26 24.0 MT-TF-201 Mt tRNA GM23248 (Cell line)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 18.00 6.38 0.77 64.29 MT-TF-201 Mt tRNA GM23248 (Cell line)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 73.00 23.55 3.13 100.0 MT-TV-201 Mt tRNA GM23248 (Cell line)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 19.00 0.77 0.81 70.37 MT-RNR2-201 Mt rRNA GM23248 (Cell line)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 6.00 0.24 0.26 100.0 MT-RNR2-201 Mt rRNA GM23248 (Cell line)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 11.00 0.44 0.47 100.0 MT-RNR2-201 Mt rRNA GM23248 (Cell line)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 5.00 0.20 0.21 100.0 MT-RNR2-201 Mt rRNA GM23248 (Cell line)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 44.00 1.77 1.88 93.62 MT-RNR2-201 Mt rRNA GM23248 (Cell line)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 1.00 0.04 0.04 100.0 MT-RNR2-201 Mt rRNA GM23248 (Cell line)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 6.00 0.24 0.26 100.0 MT-RNR2-201 Mt rRNA GM23248 (Cell line)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 163.00 33.89 6.98 100.0 MT-TI-201 Mt tRNA GM23248 (Cell line)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 112.00 23.28 4.80 90.32 MT-TI-201 Mt tRNA GM23248 (Cell line)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 210.86 15.30 9.03 42.86 MT-TQ-201 Mt tRNA GM23248 (Cell line)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 1.00 0.07 0.04 100.0 MT-TQ-201 Mt tRNA GM23248 (Cell line)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 449.00 32.58 19.22 92.2 MT-TQ-201 Mt tRNA GM23248 (Cell line)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 295.65 21.45 12.66 68.28 MT-TQ-201 Mt tRNA GM23248 (Cell line)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 10.00 4.39 0.43 100.0 MT-TM-201 Mt tRNA GM23248 (Cell line)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 122.00 53.51 5.22 93.85 MT-TM-201 Mt tRNA GM23248 (Cell line)