ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 146.00 1.46 6.25 100.0 MIR181A2-201 miRNA GM23248 (Cell line)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 3603.00 98.85 154.26 99.67 MIR191-201 miRNA GM23248 (Cell line)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 4.00 100.00 0.17 100.0 MIR149-201 miRNA GM23248 (Cell line)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 22.00 14.77 0.94 100.0 MIR181C-201 miRNA GM23248 (Cell line)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 105.00 70.47 4.50 88.98 MIR181C-201 miRNA GM23248 (Cell line)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 19.00 86.36 0.81 86.36 MIR128-2-201 miRNA GM23248 (Cell line)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 465.00 92.45 19.91 95.29 MIR99A-201 miRNA GM23248 (Cell line)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 67.00 3.88 2.87 85.9 MIR28-201 miRNA GM23248 (Cell line)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 9.00 0.52 0.39 100.0 MIR28-201 miRNA GM23248 (Cell line)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 1504.00 86.99 64.39 93.01 MIR28-201 miRNA GM23248 (Cell line)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 8.00 33.33 0.34 100.0 MIR145-201 miRNA GM23248 (Cell line)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 10.00 41.67 0.43 100.0 MIR145-201 miRNA GM23248 (Cell line)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 1111.00 96.44 47.57 97.46 MIR186-201 miRNA GM23248 (Cell line)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 13.00 36.11 0.56 100.0 MIR218-1-201 miRNA GM23248 (Cell line)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 1039.00 91.78 44.48 97.28 MIR181B2-201 miRNA GM23248 (Cell line)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 1.00 20.00 0.04 100.0 MIR495-201 miRNA GM23248 (Cell line)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 44462.00 85.55 1903.57 86.15 MIR10B-201 miRNA GM23248 (Cell line)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 14.00 26.92 0.60 100.0 MIR130B-201 miRNA GM23248 (Cell line)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 25.30 48.65 1.08 76.66 MIR130B-201 miRNA GM23248 (Cell line)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 10.66 20.49 0.46 30.45 MIR130B-201 miRNA GM23248 (Cell line)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 261.00 3.38 11.17 100.0 MIR199A1-201 miRNA GM23248 (Cell line)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 20.00 76.92 0.86 100.0 MIR487B-201 miRNA GM23248 (Cell line)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 122.05 73.08 5.23 77.74 MIR93-201 miRNA GM23248 (Cell line)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 26.68 15.98 1.14 21.18 MIR93-201 miRNA GM23248 (Cell line)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 11.00 64.71 0.47 100.0 MIR532-201 miRNA GM23248 (Cell line)