ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 136188.00 97.04 282.39 100.0 MEG8-228 lncRNA diencephalon (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 13196.00 21.63 27.36 100.0 SNHG14-254 lncRNA diencephalon (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 20578.00 19.86 42.67 100.0 SNHG14-261 lncRNA diencephalon (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 42815.00 41.31 88.78 88.53 SNHG14-261 lncRNA diencephalon (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 8.00 0.19 0.02 100.0 LIMD1-AS1-204 lncRNA diencephalon (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 811.00 18.99 1.68 82.92 LIMD1-AS1-204 lncRNA diencephalon (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 524839.00 75.00 1088.26 93.89 MIR99AHG-262 lncRNA diencephalon (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 14330.00 2.05 29.71 100.0 MIR99AHG-262 lncRNA diencephalon (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 3538.00 3.54 7.34 100.0 SNHG14-266 lncRNA diencephalon (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 2118.00 67.84 4.39 100.0 SNHG14-270 lncRNA diencephalon (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 2326.00 0.51 4.82 100.0 SNHG14-275 lncRNA diencephalon (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 3805.00 0.87 7.89 100.0 MIR9-2HG-225 lncRNA diencephalon (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 389480.00 89.00 807.59 92.57 MIR9-2HG-225 lncRNA diencephalon (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 1106.00 13.41 2.29 100.0 MEG8-233 lncRNA diencephalon (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 3942.00 47.78 8.17 100.0 MEG8-233 lncRNA diencephalon (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 10369.00 19.05 21.50 100.0 SNHG14-278 lncRNA diencephalon (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 14059.00 25.83 29.15 92.09 SNHG14-278 lncRNA diencephalon (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 9110.00 59.28 18.89 100.0 MEG8-234 lncRNA diencephalon (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 435.00 2.83 0.90 100.0 MEG8-234 lncRNA diencephalon (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 1295.00 69.62 2.69 100.0 SNHG17-252 lncRNA diencephalon (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 26218.00 33.64 54.36 68.03 SNHG14-288 lncRNA diencephalon (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 42455.00 54.47 88.03 91.87 SNHG14-288 lncRNA diencephalon (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 5876.00 5.90 12.18 100.0 SNHG14-295 lncRNA diencephalon (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 10831.00 81.68 22.46 100.0 MEG8-240 lncRNA diencephalon (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 1744.00 4.33 3.62 100.0 SNHG14-303 lncRNA diencephalon (Tissue)