ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 7975.00 3.11 16.54 100.0 SNHG14-306 lncRNA diencephalon (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 7285.00 2.84 15.11 100.0 SNHG14-306 lncRNA diencephalon (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 152226.00 59.34 315.64 97.73 SNHG14-306 lncRNA diencephalon (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 9152.00 3.57 18.98 100.0 SNHG14-306 lncRNA diencephalon (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 164.00 1.26 0.34 100.0 ENST00000666735 lncRNA diencephalon (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 5735.00 44.11 11.89 100.0 ENST00000666735 lncRNA diencephalon (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 45935.00 91.12 95.25 100.0 MEG8-242 lncRNA diencephalon (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 33610.57 22.88 69.69 29.19 SNHG14-312 lncRNA diencephalon (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 81737.27 55.64 169.48 70.99 SNHG14-312 lncRNA diencephalon (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 4066.00 2.77 8.43 100.0 SNHG14-312 lncRNA diencephalon (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 1921.00 0.87 3.98 100.0 MEG8-244 lncRNA diencephalon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 2383.00 1.08 4.94 100.0 MEG8-244 lncRNA diencephalon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 212595.00 96.24 440.82 99.98 MEG8-244 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 366.00 0.01 0.76 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 12.00 0.00 0.02 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 7095.00 0.24 14.71 99.04 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 435.31 0.01 0.90 45.87 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 4304.00 0.14 8.92 87.75 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1881200.00 62.36 3900.69 98.73 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1214.00 0.04 2.52 70.58 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 100915.00 3.34 209.25 99.58 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 9612.00 0.32 19.93 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 338695.00 11.23 702.29 99.77 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 177.00 0.01 0.37 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1654.00 0.05 3.43 100.0 SNHG1-248 lncRNA diencephalon (Tissue)