ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 4673.00 42.74 9.69 87.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 1397.00 69.71 2.90 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 916.00 71.62 1.90 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 150.00 8.76 0.31 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 30485.00 94.00 63.21 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 2032.00 91.00 4.21 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 6587.00 62.02 13.66 97.73 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 132.00 1.24 0.27 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 1043.00 0.35 2.16 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 907.00 45.78 1.88 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 199.00 7.80 0.41 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 889.00 7.22 1.84 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 1176.00 9.54 2.44 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 393.00 3.19 0.81 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA diencephalon (Tissue)