ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 7255.00 12.92 15.04 57.47 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 5155.00 9.18 10.69 100.0 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 14595.00 25.99 30.26 80.92 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 19312.00 1.59 40.04 100.0 MIRLET7A1HG-203 lncRNA diencephalon (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 34210.00 93.29 70.93 100.0 MEG8-225 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 371850.00 84.68 771.03 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 175.00 0.04 0.36 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 482.00 0.11 1.00 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 3087.00 0.70 6.40 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 15255.00 3.47 31.63 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 40653.00 9.26 84.29 100.0 SNHG29-232 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 1455.00 0.27 3.02 100.0 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 217108.00 40.50 450.18 96.33 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 1656.00 0.31 3.43 100.0 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 39331.00 7.34 81.55 100.0 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 79451.00 14.82 164.74 100.0 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 76428.00 14.26 158.47 95.69 SNHG14-234 lncRNA diencephalon (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 1031.00 7.16 2.14 71.85 ENST00000655317 lncRNA diencephalon (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 2406.00 16.71 4.99 100.0 ENST00000655317 lncRNA diencephalon (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 929.00 6.45 1.93 38.55 ENST00000655317 lncRNA diencephalon (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 565.00 3.92 1.17 100.0 ENST00000655317 lncRNA diencephalon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 1751.00 16.04 3.63 86.98 LINC01962-202 lncRNA diencephalon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 6868.00 62.92 14.24 100.0 LINC01962-202 lncRNA diencephalon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 270.00 2.47 0.56 100.0 LINC01962-202 lncRNA diencephalon (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 91831.00 22.19 190.41 94.35 SNHG14-241 lncRNA diencephalon (Tissue)