ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 2.00 0.02 0.00 66.67 RPL5-205 retained intron lung (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 6881.00 68.47 10.36 100.0 RPL5-205 retained intron lung (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 1569.00 15.61 2.36 100.0 RPL5-205 retained intron lung (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 157.00 21.48 0.24 100.0 ZBED9-AS1-201 lncRNA lung (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 28822.00 91.85 43.39 100.0 RPS3A-206 retained intron lung (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 50891.00 95.97 76.61 100.0 COX7C-203 protein coding lung (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 11862.00 3.52 17.86 88.14 RACK1-229 protein coding lung (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1712.00 0.51 2.58 100.0 RACK1-229 protein coding lung (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 221951.55 65.84 334.14 72.09 RACK1-229 protein coding lung (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 81516.62 24.18 122.72 32.03 RACK1-229 protein coding lung (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 53152.00 18.97 80.02 67.25 RACK1-230 retained intron lung (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 222908.00 79.55 335.58 96.95 RACK1-230 retained intron lung (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 38.00 22.35 0.06 100.0 RNA5SP486-201 rRNA pseudogene lung (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 2984.00 85.18 4.49 100.0 SCARNA5-201 scaRNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 907.00 0.31 1.37 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 189.00 0.07 0.28 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 140165.00 48.22 211.01 97.7 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 18563.00 6.39 27.95 99.19 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 328.00 0.11 0.49 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 2895.00 1.00 4.36 41.7 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 42736.00 14.70 64.34 92.53 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 2859.00 0.98 4.30 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 9641.00 3.32 14.51 74.51 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 390.00 0.13 0.59 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 203.00 0.07 0.31 52.05 RNY4-201 misc RNA lung (Tissue)