ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 907.00 0.31 1.37 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 17751.00 88.41 26.72 94.19 MIR3142HG-201 lncRNA lung (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 20012.00 87.11 30.13 100.0 SNHG6-204 retained intron lung (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 132658.00 54.78 199.71 100.0 MIR151A-201 miRNA lung (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 86995.00 35.92 130.97 84.38 MIR151A-201 miRNA lung (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 3440.00 95.45 5.18 100.0 DENND3-221 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 214.00 0.01 0.32 71.81 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 26.00 0.00 0.04 100.0 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 42.00 0.00 0.06 66.67 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 1934.00 0.06 2.91 74.67 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 21.00 0.00 0.03 33.33 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 390.00 0.01 0.59 100.0 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 862.00 0.03 1.30 100.0 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 286.00 0.01 0.43 100.0 WDR74-204 protein coding lung (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 20079.00 86.27 30.23 100.0 HSPA8-211 retained intron lung (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 2061.00 20.72 3.10 100.0 SCARNA9-201 lncRNA lung (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 100661.00 93.87 151.54 100.0 TAF1D-215 retained intron lung (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 1254.00 1.17 1.89 100.0 TAF1D-215 retained intron lung (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 613.00 8.05 0.92 100.0 HSPA8-215 retained intron lung (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 5181.00 68.04 7.80 100.0 HSPA8-215 retained intron lung (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 74.00 0.97 0.11 100.0 HSPA8-215 retained intron lung (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 901.00 26.01 1.36 100.0 RPS2-215 retained intron lung (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 1794050.00 86.53 2700.89 87.32 ENST00000548801 lncRNA lung (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 6278.00 28.48 9.45 100.0 ENST00000554988 lncRNA lung (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 81.00 0.37 0.12 100.0 ENST00000554988 lncRNA lung (Tissue)