ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 5.00 5.00 0.01 100.0 HCN2-201 protein coding lung (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 3170.00 93.84 4.77 100.0 SLC49A4-201 protein coding lung (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 1014.00 36.59 1.53 100.0 ATP5MC3-201 protein coding lung (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 84.00 83.17 0.13 100.0 CDC25A-201 protein coding lung (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 98.00 70.50 0.15 100.0 BLOC1S4-201 protein coding lung (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 219.00 7.83 0.33 100.0 ATAD5-201 protein coding lung (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 289.00 28.99 0.44 100.0 SLITRK5-201 protein coding lung (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 44.00 50.00 0.07 100.0 HASPIN-201 protein coding lung (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 2665.00 91.74 4.01 100.0 PRR14L-201 protein coding lung (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 2600.00 97.93 3.91 100.0 ATG101-201 protein coding lung (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 1028.00 81.33 1.55 100.0 PRICKLE1-201 protein coding lung (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 5918.00 98.26 8.91 99.83 MIR133A2-201 miRNA lung (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 26.00 29.89 0.04 100.0 PBLD-204 protein coding lung (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 375171.00 90.28 564.81 98.14 MIRLET7BHG-201 lncRNA lung (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 17900.00 4.31 26.95 87.38 MIRLET7BHG-201 lncRNA lung (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 975.00 1.44 1.47 60.86 MIR375-201 miRNA lung (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 65821.00 97.08 99.09 98.68 MIR375-201 miRNA lung (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 8404.00 61.50 12.65 100.0 MIR30E-201 miRNA lung (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 3905.00 28.58 5.88 100.0 MIR30E-201 miRNA lung (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 514.00 45.57 0.77 100.0 MIR29A-201 miRNA lung (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 1798.00 85.66 2.71 100.0 MIR345-201 miRNA lung (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 296214.00 99.09 445.94 100.0 MIR16-2-201 miRNA lung (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 407.00 6.38 0.61 100.0 MIR340-201 miRNA lung (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 5545.00 86.86 8.35 100.0 MIR340-201 miRNA lung (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 7788.00 80.40 11.72 100.0 MIR107-201 miRNA lung (Tissue)