ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 1.00 0.01 0.00 50.0 RPL5-205 retained intron skin of body (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 22.00 1.18 0.06 100.0 ZBED9-AS1-201 lncRNA skin of body (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 22584.00 90.69 58.72 100.0 RPS3A-206 retained intron skin of body (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 12197.00 92.39 31.71 100.0 COX7C-203 protein coding skin of body (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 630.00 0.50 1.64 100.0 RACK1-229 protein coding skin of body (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 26158.46 20.69 68.01 32.85 RACK1-229 protein coding skin of body (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 95356.68 75.41 247.94 83.53 RACK1-229 protein coding skin of body (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 3245.00 2.57 8.44 86.3 RACK1-229 protein coding skin of body (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 60967.00 70.72 158.52 95.57 RACK1-230 retained intron skin of body (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 22840.00 26.49 59.39 73.01 RACK1-230 retained intron skin of body (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 3.00 7.14 0.01 100.0 RNA5SP486-201 rRNA pseudogene skin of body (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 536.00 70.71 1.39 100.0 SCARNA5-201 scaRNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 580.00 0.32 1.51 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 14433.00 7.90 37.53 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 1440.00 0.79 3.74 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 104328.00 57.10 271.26 97.99 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 973.00 0.53 2.53 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 9280.00 5.08 24.13 98.08 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 261.00 0.14 0.68 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 2500.00 1.37 6.50 43.98 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 8174.00 4.47 21.25 59.63 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 7426.00 4.06 19.31 77.67 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 491.00 0.27 1.28 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 142.00 0.08 0.37 41.04 RNY4-201 misc RNA skin of body (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1810.00 80.52 4.71 86.19 MIR3142HG-201 lncRNA skin of body (Tissue)