ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 3457.00 82.00 8.99 100.0 SNHG6-204 retained intron skin of body (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 23000.00 50.86 59.80 86.72 MIR151A-201 miRNA skin of body (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 17439.00 38.56 45.34 100.0 MIR151A-201 miRNA skin of body (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 5610.00 96.36 14.59 100.0 DENND3-221 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 1794.00 1.07 4.66 100.0 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 243.00 0.14 0.63 100.0 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 173.00 0.10 0.45 70.61 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 6.00 0.00 0.02 100.0 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 29.00 0.02 0.08 64.44 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 2122.00 1.26 5.52 76.08 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 639.00 0.38 1.66 100.0 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 16.00 0.01 0.04 35.56 WDR74-204 protein coding skin of body (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 7763.00 80.95 20.18 100.0 HSPA8-211 retained intron skin of body (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 296.00 11.50 0.77 100.0 SCARNA9-201 lncRNA skin of body (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 42642.00 88.44 110.87 100.0 TAF1D-215 retained intron skin of body (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 333.00 0.69 0.87 100.0 TAF1D-215 retained intron skin of body (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 1743.00 17.03 4.53 100.0 HSPA8-215 retained intron skin of body (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 6158.00 60.18 16.01 100.0 HSPA8-215 retained intron skin of body (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 17.00 0.17 0.04 100.0 HSPA8-215 retained intron skin of body (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 387.00 11.65 1.01 100.0 RPS2-215 retained intron skin of body (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 444428.00 87.48 1155.56 88.28 ENST00000548801 lncRNA skin of body (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 377.00 6.39 0.98 100.0 ENST00000554988 lncRNA skin of body (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 898.00 15.22 2.33 100.0 ENST00000554988 lncRNA skin of body (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 182.00 3.08 0.47 100.0 ENST00000554988 lncRNA skin of body (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 382.00 0.75 0.99 100.0 SNHG14-220 retained intron skin of body (Tissue)