ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 3.00 6.98 0.01 100.0 HCN2-201 protein coding skin of body (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 269.00 87.34 0.70 100.0 SLC49A4-201 protein coding skin of body (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 469.00 16.08 1.22 100.0 ATP5MC3-201 protein coding skin of body (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 1511.00 95.09 3.93 100.0 CDC25A-201 protein coding skin of body (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 2035.00 70.42 5.29 100.0 BLOC1S4-201 protein coding skin of body (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 1051.00 19.22 2.73 100.0 ATAD5-201 protein coding skin of body (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 709.00 37.28 1.84 100.0 SLITRK5-201 protein coding skin of body (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 20.00 35.09 0.05 100.0 HASPIN-201 protein coding skin of body (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 783.00 69.17 2.04 100.0 PRR14L-201 protein coding skin of body (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 3407.00 97.04 8.86 100.0 ATG101-201 protein coding skin of body (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 9131.00 87.77 23.74 100.0 PRICKLE1-201 protein coding skin of body (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 131762.00 92.09 342.59 94.33 MIR133A2-201 miRNA skin of body (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 9.00 22.50 0.02 100.0 PBLD-204 protein coding skin of body (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 632033.00 88.03 1643.35 98.89 MIRLET7BHG-201 lncRNA skin of body (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 57567.00 8.02 149.68 92.7 MIRLET7BHG-201 lncRNA skin of body (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 29.00 1.42 0.08 32.58 MIR375-201 miRNA skin of body (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 1990.00 97.45 5.17 98.81 MIR375-201 miRNA skin of body (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 7455.00 71.39 19.38 100.0 MIR30E-201 miRNA skin of body (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 1937.00 18.55 5.04 100.0 MIR30E-201 miRNA skin of body (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 224.00 55.17 0.58 100.0 MIR29A-201 miRNA skin of body (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 628.00 77.63 1.63 100.0 MIR345-201 miRNA skin of body (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 147865.00 98.41 384.46 100.0 MIR16-2-201 miRNA skin of body (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 147.00 2.43 0.38 100.0 MIR340-201 miRNA skin of body (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 5554.00 91.94 14.44 100.0 MIR340-201 miRNA skin of body (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 8175.00 75.35 21.26 100.0 MIR107-201 miRNA skin of body (Tissue)