ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 5536.00 48.74 6.18 100.0 LIMD1-AS1-204 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1500.00 13.21 1.68 89.18 LIMD1-AS1-204 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 13469.00 78.14 15.04 91.07 MIR99AHG-262 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1313.00 7.62 1.47 100.0 MIR99AHG-262 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 78.00 3.28 0.09 100.0 SNHG14-266 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 5258.00 78.34 5.87 100.0 SNHG14-270 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 1319.00 0.48 1.47 100.0 SNHG14-275 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 28.00 8.24 0.03 96.55 MIR9-2HG-225 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 43.00 25.44 0.05 100.0 MEG8-233 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 55.00 32.54 0.06 100.0 MEG8-233 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 10748.00 3.77 12.00 100.0 SNHG14-278 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 246539.00 86.42 275.31 95.04 SNHG14-278 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 279.00 50.54 0.31 100.0 MEG8-234 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 78.00 14.13 0.09 100.0 MEG8-234 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 5867.00 91.19 6.55 100.0 SNHG17-252 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 10175.00 29.51 11.36 72.84 SNHG14-288 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 19799.00 57.42 22.11 88.14 SNHG14-288 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 292.00 10.20 0.33 100.0 SNHG14-295 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 96.00 65.75 0.11 100.0 MEG8-240 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 18758.00 46.94 20.95 100.0 SNHG14-303 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 361.00 2.18 0.40 100.0 SNHG14-306 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 12.00 0.07 0.01 100.0 SNHG14-306 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 13795.00 83.29 15.40 99.44 SNHG14-306 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 53.00 0.32 0.06 100.0 SNHG14-306 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 130.00 4.45 0.15 100.0 ENST00000666735 lncRNA hepatocyte (In vitro differentiated cells)