ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 90.00 14.08 0.60 100.0 FTX-219 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 391.00 61.19 2.61 90.72 FTX-219 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 200.00 1.24 1.33 55.56 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 258.00 1.60 1.72 33.81 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 9372.00 58.10 62.45 86.48 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 160.00 0.99 1.07 44.44 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 3032.00 18.80 20.20 57.87 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 132.00 0.82 0.88 100.0 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 656.00 4.07 4.37 100.0 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 651.00 4.04 4.34 100.0 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 629.00 2.29 4.19 74.35 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 353.00 1.29 2.35 96.71 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 107.00 0.39 0.71 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1089.00 3.97 7.26 49.77 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 32.00 0.12 0.21 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 45.00 0.16 0.30 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 582.00 2.12 3.88 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 51.00 0.19 0.34 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 25.00 0.09 0.17 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 4203.00 15.33 28.01 45.97 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 126.00 0.46 0.84 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 13575.00 49.52 90.46 86.08 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 5016.00 0.88 33.43 100.0 MIRLET7A1HG-203 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 718.00 88.10 4.78 100.0 MEG8-225 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 22427.00 88.24 149.45 100.0 SNHG29-232 lncRNA esophagus muscularis mucosa (Tissue)