ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 3146.00 91.48 20.96 100.0 DNM3OS-205 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 1644.00 0.63 10.96 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 183.00 0.07 1.22 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 74.00 0.03 0.49 90.24 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 1091.00 0.42 7.27 90.61 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 14.00 0.01 0.09 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 18.00 0.01 0.12 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 96.00 0.04 0.64 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 128079.00 49.25 853.49 99.82 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 278.00 0.11 1.85 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 1617.00 0.62 10.78 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 328.00 0.13 2.19 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 140.00 0.05 0.93 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1453.00 0.56 9.68 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 126.00 0.05 0.84 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 854.00 0.33 5.69 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 3951.00 1.52 26.33 81.33 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 2367.00 0.91 15.77 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 1098.00 0.42 7.32 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 525.00 0.20 3.50 88.68 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 7016.00 2.70 46.75 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 79.00 0.03 0.53 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 658.00 0.25 4.38 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 101429.00 39.00 675.90 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 87.00 0.03 0.58 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)