ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 639.00 9.27 4.26 76.71 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 17.00 7.59 0.11 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 3.00 0.47 0.02 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 24.00 2.11 0.16 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 1923.00 86.12 12.81 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 209.00 92.89 1.39 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 19406.00 42.92 129.32 96.83 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 322.00 0.71 2.15 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 25.00 0.07 0.17 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1393.00 58.93 9.28 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 185.00 4.09 1.23 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 33.00 1.60 0.22 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 151.00 7.30 1.01 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 86.00 4.16 0.57 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 3.00 5.26 0.02 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA esophagus muscularis mucosa (Tissue)