ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 266.00 0.70 1.92 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 8427.00 22.04 60.77 61.03 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 334.00 0.87 2.41 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 18057.00 47.23 130.21 83.26 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 20772.00 2.84 149.78 100.0 MIRLET7A1HG-203 lncRNA upper lobe of left lung (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 459.00 96.23 3.31 100.0 MEG8-225 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 3959.00 66.71 28.55 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 607.00 10.23 4.38 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 505.00 8.51 3.64 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 4.00 0.07 0.03 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 1.00 0.02 0.01 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 6.00 0.10 0.04 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 386.00 9.12 2.78 100.0 SNHG14-234 lncRNA upper lobe of left lung (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 133.00 3.14 0.96 100.0 SNHG14-234 lncRNA upper lobe of left lung (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 324.00 1.64 2.34 100.0 ENST00000655317 lncRNA upper lobe of left lung (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 13944.00 70.76 100.55 94.54 ENST00000655317 lncRNA upper lobe of left lung (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 544.00 0.88 3.92 46.46 LINC01962-202 lncRNA upper lobe of left lung (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 56434.00 91.33 406.94 100.0 LINC01962-202 lncRNA upper lobe of left lung (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 545.00 0.88 3.93 100.0 LINC01962-202 lncRNA upper lobe of left lung (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 1748.00 96.41 12.60 100.0 MEG8-228 lncRNA upper lobe of left lung (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 1164.00 21.00 8.39 100.0 LIMD1-AS1-204 lncRNA upper lobe of left lung (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 912.00 16.45 6.58 91.11 LIMD1-AS1-204 lncRNA upper lobe of left lung (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 3021.00 48.97 21.78 84.53 MIR99AHG-262 lncRNA upper lobe of left lung (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1882.00 30.51 13.57 100.0 MIR99AHG-262 lncRNA upper lobe of left lung (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 8.00 21.62 0.06 88.89 MIR9-2HG-225 lncRNA upper lobe of left lung (Tissue)