ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 219.00 49.32 1.58 100.0 MEG8-233 lncRNA upper lobe of left lung (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 98.00 22.07 0.71 100.0 MEG8-233 lncRNA upper lobe of left lung (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 136.00 25.19 0.98 100.0 MEG8-234 lncRNA upper lobe of left lung (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 140.00 25.93 1.01 100.0 MEG8-234 lncRNA upper lobe of left lung (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 77.00 52.03 0.56 100.0 MEG8-240 lncRNA upper lobe of left lung (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 8.00 15.09 0.06 100.0 SNHG14-306 lncRNA upper lobe of left lung (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 4.00 7.55 0.03 100.0 SNHG14-306 lncRNA upper lobe of left lung (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 141.00 7.34 1.02 100.0 ENST00000666735 lncRNA upper lobe of left lung (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 49.00 2.55 0.35 100.0 ENST00000666735 lncRNA upper lobe of left lung (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 383.00 73.09 2.76 100.0 MEG8-242 lncRNA upper lobe of left lung (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 57.00 0.28 0.41 100.0 MEG8-244 lncRNA upper lobe of left lung (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 158.00 0.78 1.14 100.0 MEG8-244 lncRNA upper lobe of left lung (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 19747.00 97.73 142.39 99.65 MEG8-244 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1658.00 0.31 11.96 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 5.00 0.00 0.04 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 10137.00 1.91 73.10 98.42 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 2037.72 0.38 14.69 62.01 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1328.00 0.25 9.58 83.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 136469.00 25.71 984.06 99.65 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1319.00 0.25 9.51 80.38 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 116646.00 21.98 841.12 99.28 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 15192.00 2.86 109.55 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 64747.00 12.20 466.88 99.83 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 208.00 0.04 1.50 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 164.00 0.03 1.18 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)