ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 6952.00 24.13 50.13 71.13 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 139.00 0.03 1.00 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 866.00 0.49 6.24 88.82 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 1141.00 44.68 8.23 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 543.00 6.43 3.92 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 432650.00 99.08 3119.80 99.93 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 28.00 0.05 0.20 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 22550.00 42.33 162.61 81.73 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 187.00 36.74 1.35 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 39.00 1.80 0.28 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 200.00 10.50 1.44 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 62762.00 98.79 452.57 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 2666.00 97.51 19.22 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 122440.00 65.68 882.90 90.54 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 483.00 0.26 3.48 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 78.00 0.02 0.56 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 2108.00 44.66 15.20 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 724.00 6.24 5.22 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 100.00 6.36 0.72 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 182.00 11.58 1.31 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 203.00 12.91 1.46 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 9.00 9.38 0.06 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA upper lobe of left lung (Tissue)