ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 36.00 1.34 0.24 47.37 RACK1-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 296.00 10.99 1.96 90.8 RACK1-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 56.00 3.75 0.37 100.0 RNA5SP486-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1230.00 84.54 8.15 100.0 SCARNA5-201 scaRNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 33.00 0.08 0.22 37.08 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 2401.00 5.53 15.90 55.95 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 18.00 0.04 0.12 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 5.00 0.01 0.03 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 969.00 2.23 6.42 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 7.00 0.02 0.05 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 28859.00 66.48 191.17 93.85 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 55.00 0.13 0.36 77.46 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 3.00 0.01 0.02 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 245.00 0.56 1.62 24.38 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 2272.00 5.23 15.05 99.3 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 23.00 0.05 0.15 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 64.00 51.61 0.42 95.52 MIR3142HG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 3.00 0.74 0.02 100.0 SNHG6-204 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 106766.00 34.59 707.24 100.0 MIR151A-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 168133.00 54.47 1113.75 85.65 MIR151A-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 3766.00 99.52 24.95 100.0 DENND3-221 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 1.00 0.01 0.01 100.0 WDR74-204 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 20.00 0.22 0.13 55.56 WDR74-204 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 4.00 0.04 0.03 66.67 WDR74-204 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 2.00 0.02 0.01 33.33 WDR74-204 protein coding trophoblast cell (In vitro differentiated cells)