ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 1.00 1.45 0.01 100.0 HCN2-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 109.00 6.51 0.72 100.0 ATP5MC3-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 159.00 79.10 1.05 100.0 CDC25A-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 30.00 51.72 0.20 100.0 BLOC1S4-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 4.00 2.04 0.03 100.0 ATAD5-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 41.00 4.50 0.27 100.0 SLITRK5-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 15.00 26.32 0.10 100.0 HASPIN-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 3904.00 96.92 25.86 100.0 ATG101-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 365.00 86.29 2.42 100.0 PRICKLE1-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 2506.00 97.55 16.60 99.76 MIR133A2-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 35.00 14.89 0.23 100.0 PBLD-204 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 2.00 0.18 0.01 100.0 MIRLET7BHG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 913.00 84.38 6.05 99.46 MIRLET7BHG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 79.00 1.85 0.52 73.83 MIR375-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 4133.00 96.77 27.38 99.02 MIR375-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 91495.00 89.79 606.08 100.0 MIR30E-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 8497.00 8.34 56.29 100.0 MIR30E-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 831.00 64.72 5.50 100.0 MIR29A-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 6745.00 93.52 44.68 100.0 MIR345-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 160095.00 98.72 1060.50 100.0 MIR16-2-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 347.00 3.48 2.30 100.0 MIR340-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 9344.00 93.72 61.90 100.0 MIR340-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 9571.00 83.68 63.40 100.0 MIR107-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 30.00 81.08 0.20 85.71 MIR381-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 119875.00 93.45 794.08 97.69 MIR103A2-201 miRNA trophoblast cell (In vitro differentiated cells)