ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 12.00 0.11 0.08 100.0 RPL13A-212 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 645.00 5.69 4.27 100.0 RPL13A-212 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 11.00 0.10 0.07 100.0 RPL13A-212 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 34.00 0.63 0.23 89.47 RPL7A-207 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 1947.00 36.31 12.90 100.0 RPL7A-207 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 112.00 2.09 0.74 100.0 RPL7A-207 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 10.00 0.70 0.07 100.0 NOP56-217 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 618.00 43.13 4.09 100.0 NOP56-217 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 408.00 3.92 2.70 100.0 RABGGTB-213 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 168.00 1.61 1.11 89.84 RABGGTB-213 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 117.00 1.12 0.78 99.15 RABGGTB-213 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 1.00 0.01 0.01 100.0 RABGGTB-213 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 19.00 0.18 0.13 10.16 RABGGTB-213 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 3037.00 29.14 20.12 100.0 RABGGTB-213 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 34.00 0.33 0.23 100.0 RABGGTB-213 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 158.00 3.33 1.05 100.0 GNL3-211 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 2268.00 47.83 15.02 100.0 GNL3-211 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 2170.00 78.54 14.37 100.0 RPL5-205 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 371.00 3.99 2.46 100.0 ZBED9-AS1-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 296.00 31.79 1.96 100.0 RPS3A-206 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 1813.00 48.18 12.01 100.0 COX7C-203 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 710.66 11.92 4.71 55.65 RACK1-229 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 564.51 9.47 3.74 42.86 RACK1-229 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 457.00 7.67 3.03 43.4 RACK1-229 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 10.00 0.17 0.07 100.0 RACK1-229 protein coding trophoblast cell (In vitro differentiated cells)